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  5. MA_86300g0010

MA_86300g0010


Description : (at2g45420 : 182.0) LOB domain-containing protein 18 (LBD18); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Uncharacterised conserved protein UCP038127, LOB (InterPro:IPR017394); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT4G00220.1); Has 12357 Blast hits to 5209 proteins in 472 species: Archae - 12; Bacteria - 2131; Metazoa - 4972; Fungi - 448; Plants - 3332; Viruses - 154; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)


Gene families : OG_42_0000426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_86300g0010
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
At4g00220 No alias LOB domain-containing protein 30... 0.03 Orthogroups_2024-Update
MA_101817g0010 No alias (at2g45420 : 191.0) LOB domain-containing protein 18... 0.03 Orthogroups_2024-Update
MA_126761g0010 No alias (at3g03760 : 191.0) LOB domain-containing protein 20... 0.04 Orthogroups_2024-Update
MA_962403g0010 No alias (at4g00220 : 164.0) Encodes a protein containing a LOB... 0.06 Orthogroups_2024-Update
PSME_00010378-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 105
No external refs found!