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  5. Solyc10g085090

Solyc10g085090


Description : Laccase (AHRD V3.3 *** P93366_TOBAC)


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g085090
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
A4A49_05486 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_18568 No alias laccase-4 0.04 Orthogroups_2024-Update
A4A49_20277 No alias laccase-11 0.02 Orthogroups_2024-Update
Bradi1g66720 No alias laccase 17 0.04 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.02 Orthogroups_2024-Update
Bradi4g44810 No alias laccase 12 0.03 Orthogroups_2024-Update
Brara.B01051.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Glyma.03G077900 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.18G183500 No alias laccase 17 0.03 Orthogroups_2024-Update
Glyma.20G172600 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
LOC_Os01g27700 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g61160 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_33288g0010 No alias (at5g05390 : 575.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00003270-RA No alias (at5g60020 : 723.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.005G200700 No alias laccase 14 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.006G096900 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
Potri.008G064000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.008G073700 No alias laccase 5 0.03 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.010G183600 No alias laccase 5 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.019G124300 No alias laccase 3 0.04 Orthogroups_2024-Update
Pp1s175_122V6 No alias laccase 90a 0.02 Orthogroups_2024-Update
Seita.3G297100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sobic.004G236100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sobic.005G005800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sobic.009G162800.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Solyc04g072280 No alias Laccase (AHRD V3.3 *** A0A022Q9N6_ERYGU) 0.03 Orthogroups_2024-Update
Solyc09g014240 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 126 275
IPR011707 Cu-oxidase_3 2 112
IPR011706 Cu-oxidase_2 381 509
No external refs found!