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  5. MA_8693914g0010

MA_8693914g0010


Description : (at5g05280 : 130.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lrb7|el5_orysa : 82.4) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_8693914g0010
Cluster HCCA clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
A4A49_07471 No alias ring-h2 finger protein atl70 0.02 Orthogroups_2024-Update
A4A49_11165 No alias ring-h2 finger protein atl8 0.02 Orthogroups_2024-Update
A4A49_18116 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_29026 No alias ring-h2 finger protein atl60 0.02 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.02 Orthogroups_2024-Update
At1g33480 No alias RING-H2 finger protein ATL58... 0.02 Orthogroups_2024-Update
At2g27940 No alias RING-H2 finger protein ATL57... 0.02 Orthogroups_2024-Update
Bradi1g32080 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Bradi1g60390 No alias hypoxia-responsive family protein / zinc finger... 0.02 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.B02007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G239900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G150400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G122400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G231400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G069670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G079930.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G051480.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G051510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os02g46100 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_1143g0010 No alias (at1g49230 : 105.0) RING/U-box superfamily protein;... 0.05 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_2679g0010 No alias (at3g16720 : 111.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_37578g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_611616g0010 No alias (at1g49230 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9515738g0010 No alias (at5g17600 : 145.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00011913-RA No alias (at3g51430 : 162.0) Although this enzyme is predicted to... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.003G073300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G113200 No alias receptor homology region transmembrane domain ring H2... 0.03 Orthogroups_2024-Update
Potri.010G010500 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s185_137V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.8G248200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g086950 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.02 Orthogroups_2024-Update
Sopen01g032660 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen01g037550 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen05g033830 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.tig00020563.21 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!