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  5. MA_8749g0010

MA_8749g0010


Description : (at5g44460 : 149.0) calmodulin like 43 (CML43); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 15485 Blast hits to 11560 proteins in 1261 species: Archae - 1; Bacteria - 65; Metazoa - 6030; Fungi - 3167; Plants - 4134; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink). & (p43187|allb3_betve : 137.0) Calcium-binding allergen Bet v 3 (Bet v III) - Betula verrucosa (White birch) (Betula pendula) & (reliability: 298.0) & (original description: no original description)


Gene families : OG_42_0002982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_8749g0010
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Brara.K01805.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
MA_13199g0010 No alias (at4g20780 : 115.0) Calcium sensor involved in trichome... 0.04 Orthogroups_2024-Update
PSME_00022992-RA No alias (at5g44460 : 128.0) calmodulin like 43 (CML43);... 0.05 Orthogroups_2024-Update
Sopen10g027230 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 42 71
IPR002048 EF_hand_dom 127 189
No external refs found!