1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_88112g0010

MA_88112g0010


Description : (at5g01070 : 99.4) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 886 Blast hits to 882 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 307; Fungi - 14; Plants - 509; Viruses - 15; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description)


Gene families : OG_42_0000872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_88112g0010
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
A4A49_35062 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Glyma.03G073772 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G064900 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G084600 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
PSME_00057231-RA No alias (at2g37950 : 89.4) RING/FYVE/PHD zinc finger superfamily... 0.04 Orthogroups_2024-Update
Potri.011G068800 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 146 196
No external refs found!