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  5. Solyc10g085380

Solyc10g085380


Description : Short-chain dehydrogenase/reductase family protein (AHRD V3.3 *** B9HD90_POPTR),Pfam:PF13561


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g085380
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_26916 No alias short-chain dehydrogenase reductase 3b 0.03 Orthogroups_2024-Update
A4A49_28903 No alias short-chain dehydrogenase reductase 2a 0.03 Orthogroups_2024-Update
A4A49_61240 No alias momilactone a synthase 0.04 Orthogroups_2024-Update
At3g42960 No alias Short-chain dehydrogenase reductase ATA1... 0.04 Orthogroups_2024-Update
Glyma.03G222600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G021540.3 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00005454-RA No alias (at3g51680 : 354.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
Potri.008G141800 No alias TAPETUM 1 0.03 Orthogroups_2024-Update
Potri.015G065700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G023000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g026000 No alias short chain dehydrogenase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!