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  5. Solyc01g097280

Solyc01g097280


Description : Pathogenesis-related protein PR-4 (AHRD V3.3 *** PR4_PRUPE)


Gene families : OG_42_0001762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g097280
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
MA_10428528g0010 No alias (at3g04720 : 124.0) Encodes a protein similar to the... 0.02 Orthogroups_2024-Update
MA_8035959g0010 No alias (p29063|pr4b_tobac : 191.0) Pathogenesis-related protein... 0.02 Orthogroups_2024-Update
Mp2g21910.1 No alias Hevein-like preproprotein OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
PSME_00007895-RA No alias (p29063|pr4b_tobac : 193.0) Pathogenesis-related protein... 0.02 Orthogroups_2024-Update
PSME_00054279-RA No alias (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... 0.05 Orthogroups_2024-Update
Potri.013G041600 No alias pathogenesis-related 4 0.04 Orthogroups_2024-Update
Sobic.005G169200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0042742 defense response to bacterium IEA InterProScan predictions
BP GO:0050832 defense response to fungus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001153 Barwin_dom 84 202
IPR001002 Chitin-bd_1 29 68
No external refs found!