Description : (at2g19810 : 241.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)
Gene families : OG_42_0000745 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000745_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_88541g0010 | |
Cluster | HCCA clusters: Cluster_215 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_35503 | No alias | zinc finger ccch domain-containing protein 20 | 0.02 | Orthogroups_2024-Update | |
Brara.A00809.1 | No alias | regulatory factor *(TZF) of mRNA stress granule formation | 0.02 | Orthogroups_2024-Update | |
Brara.I01833.1 | No alias | regulatory factor *(TZF) of mRNA stress granule formation | 0.03 | Orthogroups_2024-Update | |
Glyma.04G050300 | No alias | CCCH-type zinc finger family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G126800 | No alias | CCCH-type zinc finger family protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G019510.1 | No alias | regulatory factor *(TZF) of mRNA stress granule formation | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g45020 | No alias | zinc finger/CCCH transcription factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g47240 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
MA_98656g0010 | No alias | (at2g19810 : 248.0) CCCH-type zinc finger family... | 0.05 | Orthogroups_2024-Update | |
Mp6g00540.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G034400.1 | No alias | regulatory factor *(TZF) of mRNA stress granule formation | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046872 | metal ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000571 | Znf_CCCH | 195 | 215 |
No external refs found! |