MA_88541g0010


Description : (at2g19810 : 241.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)


Gene families : OG_42_0000745 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_88541g0010
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
A4A49_35503 No alias zinc finger ccch domain-containing protein 20 0.02 Orthogroups_2024-Update
Brara.A00809.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.02 Orthogroups_2024-Update
Brara.I01833.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.03 Orthogroups_2024-Update
Glyma.04G050300 No alias CCCH-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.07G126800 No alias CCCH-type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G019510.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.03 Orthogroups_2024-Update
LOC_Os05g45020 No alias zinc finger/CCCH transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g47240 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_98656g0010 No alias (at2g19810 : 248.0) CCCH-type zinc finger family... 0.05 Orthogroups_2024-Update
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.03 Orthogroups_2024-Update
Sobic.003G034400.1 No alias regulatory factor *(TZF) of mRNA stress granule formation 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 195 215
No external refs found!