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  5. Solyc10g085620

Solyc10g085620


Description : Myb family transcription factor APL (AHRD V3.3 *** A0A0B2R6R9_GLYSO)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g085620
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
A4A49_06925 No alias putative myb family transcription factor 0.03 Orthogroups_2024-Update
At1g69580 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT1G69580] 0.03 Orthogroups_2024-Update
Bradi1g28920 No alias phosphate starvation response 1 0.02 Orthogroups_2024-Update
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G034563 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G052544 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G056400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G049100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G247600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G017240.8 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s143_30V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Seita.3G373000.1 No alias KANADI-type transcription factor & transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sobic.006G256200.5 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G132000.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Solyc09g005030 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Sopen11g006610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen12g033150 No alias MYB-CC type transfactor, LHEQLE motif 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 144 191
IPR001005 SANT/Myb 46 97
No external refs found!