Description : (at1g07900 : 123.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)
Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_902082g0010 | |
Cluster | HCCA clusters: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_32358 | No alias | lob domain-containing protein 15 | 0.04 | Orthogroups_2024-Update | |
At3g27650 | No alias | LOB domain-containing protein 25... | 0.03 | Orthogroups_2024-Update | |
Bradi1g65760 | No alias | LOB domain-containing protein 1 | 0.02 | Orthogroups_2024-Update | |
Brara.G01383.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
GRMZM2G154320 | No alias | ASYMMETRIC LEAVES 2-like 1 | 0.02 | Orthogroups_2024-Update | |
Glyma.04G106400 | No alias | ASYMMETRIC LEAVES 2-like 1 | 0.04 | Orthogroups_2024-Update | |
Glyma.06G178900 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G152333 | No alias | LOB domain-containing protein 1 | 0.02 | Orthogroups_2024-Update | |
Glyma.11G232667 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G127900 | No alias | LOB domain-containing protein 4 | 0.03 | Orthogroups_2024-Update | |
Kfl00147_0060 | kfl00147_0060_v1.1 | (at1g65620 : 174.0) Required for formation of a... | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g39220 | No alias | DUF260 domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10434782g0020 | No alias | (at1g65620 : 214.0) Required for formation of a... | 0.03 | Orthogroups_2024-Update | |
MA_19975g0010 | No alias | (at2g28500 : 96.3) LOB domain-containing protein 11... | 0.04 | Orthogroups_2024-Update | |
MA_451290g0010 | No alias | (at1g07900 : 140.0) LOB domain-containing protein 1... | 0.04 | Orthogroups_2024-Update | |
MA_84752g0010 | No alias | (at2g40470 : 201.0) LOB domain-containing protein 15... | 0.04 | Orthogroups_2024-Update | |
MA_9839150g0010 | No alias | (at1g07900 : 148.0) LOB domain-containing protein 1... | 0.04 | Orthogroups_2024-Update | |
PSME_00020323-RA | No alias | (at1g07900 : 152.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update | |
PSME_00022332-RA | No alias | (at2g40470 : 197.0) LOB domain-containing protein 15... | 0.04 | Orthogroups_2024-Update | |
PSME_00022409-RA | No alias | (at1g07900 : 148.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update | |
PSME_00039447-RA | No alias | (at2g28500 : 163.0) LOB domain-containing protein 11... | 0.03 | Orthogroups_2024-Update | |
PSME_00043149-RA | No alias | (at1g07900 : 141.0) LOB domain-containing protein 1... | 0.04 | Orthogroups_2024-Update | |
PSME_00048913-RA | No alias | (at2g28500 : 129.0) LOB domain-containing protein 11... | 0.04 | Orthogroups_2024-Update | |
Pp1s12_355V6 | No alias | ramosa 2 | 0.02 | Orthogroups_2024-Update | |
Seita.9G443300.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc06g062630 | No alias | LOB domain-containing protein, putative (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
Solyc06g082310 | No alias | LOB domain-containing protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen11g004610 | No alias | Protein of unknown function DUF260 | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001871 | pattern binding | IEP | Predicted GO |
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008198 | ferrous iron binding | IEP | Predicted GO |
MF | GO:0008378 | galactosyltransferase activity | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Predicted GO |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0051213 | dioxygenase activity | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 10 | 107 |
No external refs found! |