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  5. Solyc10g085920

Solyc10g085920


Description : UDP-glucuronate decarboxylase protein 1 (AHRD V3.3 *** N0A9W0_POPTO)


Gene families : OG_42_0000621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc10g085920
Cluster HCCA clusters: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g21320 No alias NAD dependent epimerase/dehydratase family domain... 0.02 Orthogroups_2024-Update
MA_158402g0010 No alias (at5g59290 : 473.0) Encodes an isoform of UDP-glucuronic... 0.03 Orthogroups_2024-Update
Pp1s209_52V6 No alias aud1 udp-glucuronate decarboxylase catalytic... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 252 461
IPR016040 NAD(P)-bd_dom 128 208
No external refs found!