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  5. MA_910870g0010

MA_910870g0010


Description : (at5g56900 : 164.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)


Gene families : OG_42_0005157 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_910870g0010
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre07.g338900 No alias CwfJ-like family protein / zinc finger (CCCH-type) family protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006768 Cwf19-like_C_dom-1 140 254
No external refs found!