Description : (at4g24780 : 570.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 401.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1140.0) & (original description: no original description)
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_91467g0010 | |
Cluster | HCCA clusters: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_08453 | No alias | putative pectate lyase 5 | 0.03 | Orthogroups_2024-Update | |
A4A49_12542 | No alias | pectate lyase | 0.04 | Orthogroups_2024-Update | |
A4A49_59737 | No alias | putative pectate lyase 18 | 0.03 | Orthogroups_2024-Update | |
At1g30350 | No alias | Probable pectate lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G4] | 0.03 | Orthogroups_2024-Update | |
At3g07010 | No alias | Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8] | 0.04 | Orthogroups_2024-Update | |
Brara.G00533.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
Brara.I03611.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.04 | Orthogroups_2024-Update | |
Brara.J02392.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
Glyma.08G296900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G125000 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G020200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
PSME_00000524-RA | No alias | (at4g24780 : 590.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
PSME_00005709-RA | No alias | (at3g07010 : 494.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00009672-RA | No alias | (at5g48900 : 608.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00019559-RA | No alias | (at4g13710 : 600.0) Pectin lyase-like superfamily... | 0.05 | Orthogroups_2024-Update | |
PSME_00029400-RA | No alias | (at5g63180 : 504.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00043773-RA | No alias | (at1g67750 : 590.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.002G238800 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G148800 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.015G087800 | No alias | Pectin lyase-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Solyc02g093580 | No alias | Tomato 9612 mRNA | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 168 | 353 |
No external refs found! |