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Description : Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL2_TOBAC)
Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc10g086180 | |
| Cluster | HCCA clusters: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16794 | No alias | phenylalanine ammonia-lyase | 0.1 | Orthogroups_2024-Update | |
| A4A49_25502 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| A4A49_26864 | No alias | phenylalanine ammonia-lyase | 0.04 | Orthogroups_2024-Update | |
| A4A49_27559 | No alias | phenylalanine ammonia-lyase | 0.06 | Orthogroups_2024-Update | |
| At2g37040 | No alias | Phenylalanine ammonia-lyase 1... | 0.03 | Orthogroups_2024-Update | |
| At3g53260 | No alias | Phenylalanine ammonia-lyase 2... | 0.1 | Orthogroups_2024-Update | |
| Bradi3g49260 | No alias | PHE ammonia lyase 1 | 0.02 | Orthogroups_2024-Update | |
| Brara.D00537.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.06 | Orthogroups_2024-Update | |
| Glyma.19G182300 | No alias | PHE ammonia lyase 1 | 0.02 | Orthogroups_2024-Update | |
| Glyma.20G180800 | No alias | phenylalanine ammonia-lyase 2 | 0.05 | Orthogroups_2024-Update | |
| HORVU0Hr1G016330.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.05 | Orthogroups_2024-Update | |
| HORVU2Hr1G089440.4 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G089540.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.05 | Orthogroups_2024-Update | |
| HORVU6Hr1G058840.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.06 | Orthogroups_2024-Update | |
| LOC_Os02g41680 | No alias | phenylalanine ammonia-lyase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g43760 | No alias | phenylalanine ammonia-lyase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_123220g0010 | No alias | (p24481|pal1_petcr : 912.0) Phenylalanine ammonia-lyase... | 0.02 | Orthogroups_2024-Update | |
| MA_15852g0010 | No alias | (p25872|pal1_tobac : 829.0) Phenylalanine ammonia-lyase... | 0.02 | Orthogroups_2024-Update | |
| MA_44561g0010 | No alias | (p45729|pal3_petcr : 870.0) Phenylalanine ammonia-lyase... | 0.03 | Orthogroups_2024-Update | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Orthogroups_2024-Update | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.01 | Orthogroups_2024-Update | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Orthogroups_2024-Update | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Orthogroups_2024-Update | |
| PSME_00011716-RA | No alias | (at3g10340 : 932.0) Encodes PAL4, a putative a... | 0.03 | Orthogroups_2024-Update | |
| PSME_00022739-RA | No alias | (at3g10340 : 547.0) Encodes PAL4, a putative a... | 0.03 | Orthogroups_2024-Update | |
| Pp1s20_305V6 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| Pp1s500_4V6 | No alias | phenylalanine ammonia-lyase | 0.03 | Orthogroups_2024-Update | |
| Pp1s52_44V6 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| Seita.1G240200.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G220500.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G220700.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.04 | Orthogroups_2024-Update | |
| Solyc09g007890 | No alias | Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g034580 | No alias | Aromatic amino acid lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen09g002740 | No alias | Aromatic amino acid lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen09g002750 | No alias | Aromatic amino acid lyase | 0.11 | Orthogroups_2024-Update | |
| Sopen10g005710 | No alias | Aromatic amino acid lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen10g035560 | No alias | Aromatic amino acid lyase | 0.07 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Predicted GO |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
| BP | GO:0006020 | inositol metabolic process | IEP | Predicted GO |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| BP | GO:0006555 | methionine metabolic process | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0008272 | sulfate transport | IEP | Predicted GO |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Predicted GO |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0016987 | sigma factor activity | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0072348 | sulfur compound transport | IEP | Predicted GO |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 56 | 528 |
| No external refs found! |