1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_9257733g0010

MA_9257733g0010


Description : (q09011|cast_soltu : 108.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (at5g44460 : 103.0) calmodulin like 43 (CML43); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 15485 Blast hits to 11560 proteins in 1261 species: Archae - 1; Bacteria - 65; Metazoa - 6030; Fungi - 3167; Plants - 4134; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)


Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9257733g0010
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_18775 No alias calmodulin-like protein 3 0.02 Orthogroups_2024-Update
A4A49_23290 No alias putative calcium-binding protein cml44 0.03 Orthogroups_2024-Update
A4A49_31895 No alias calmodulin-like protein 3 0.02 Orthogroups_2024-Update
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 Orthogroups_2024-Update
Potri.005G183300 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Potri.018G127100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Sobic.006G131600.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Sopen04g026060 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 173 235
IPR002048 EF_hand_dom 96 113
No external refs found!