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  5. Solyc10g086440

Solyc10g086440


Description : Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g086440
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
A4A49_34579 No alias dof zinc finger protein pbf 0.03 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.04 Orthogroups_2024-Update
At1g47655 No alias Dof zinc finger protein DOF1.6... 0.03 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.03 Orthogroups_2024-Update
At2g34140 No alias Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] 0.05 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.04 Orthogroups_2024-Update
Bradi3g29940 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.H01999.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.J02876.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.04 Orthogroups_2024-Update
Glyma.08G358100 No alias DNA binding with one finger 2.4 0.03 Orthogroups_2024-Update
Glyma.11G140200 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.13G177600 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.18G150800 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os03g42200 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.04 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.007G058200 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.009G029500 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s12_364V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s170_42V6 No alias f-box family protein 0.04 Orthogroups_2024-Update
Pp1s1_286V6 No alias dof domain zinc finger dna-binding protein 0.03 Orthogroups_2024-Update
Pp1s392_2V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.3G014900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.4G124800.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.003G253200.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Solyc01g096120 No alias Dof zinc finger protein1 0.03 Orthogroups_2024-Update
Solyc09g010680 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen02g021750 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen06g032440 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen08g004350 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 86 141
No external refs found!