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  5. MA_929381g0010

MA_929381g0010


Description : (at1g74900 : 394.0) organelle transcript processing defect 43 (OTP43); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 177.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 788.0) & (original description: no original description)


Gene families : OG_42_0009424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_929381g0010
Cluster HCCA clusters: Cluster_173


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 119 148
IPR002885 Pentatricopeptide_repeat 154 183
IPR002885 Pentatricopeptide_repeat 324 373
IPR002885 Pentatricopeptide_repeat 394 442
IPR002885 Pentatricopeptide_repeat 185 233
IPR002885 Pentatricopeptide_repeat 255 300
No external refs found!