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  5. MA_93338g0010

MA_93338g0010


Description : (at1g80440 : 149.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G15670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)


Gene families : OG_42_0000514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_93338g0010
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
MA_10507g0010 No alias (at1g80440 : 219.0) Galactose oxidase/kelch repeat... 0.04 Orthogroups_2024-Update
Mp1g25730.1 No alias Putative F-box/kelch-repeat protein At1g27420... 0.02 Orthogroups_2024-Update
Mp6g10520.1 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 Orthogroups_2024-Update
Potri.001G178500 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Pp1s95_130V6 No alias F6E13.26; kelch repeat-containing F-box family protein... 0.02 Orthogroups_2024-Update
Seita.1G040400.1 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) 0.05 Orthogroups_2024-Update
Seita.4G226700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 44
IPR006652 Kelch_1 108 151
No external refs found!