Description : (q2hu68|h2a1_medtr : 174.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 171.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 342.0) & (original description: no original description)
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_93628g0020 | |
Cluster | HCCA clusters: Cluster_139 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g276500 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
HORVU0Hr1G013190.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G116550.5 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
MA_10434390g0010 | No alias | (at5g54640 : 110.0) Isolated from T-DNA insertion line,... | 0.04 | Orthogroups_2024-Update | |
Mp3g00840.1 | No alias | histone (H2A) | 0.02 | Orthogroups_2024-Update | |
Mp4g21750.1 | No alias | histone (H2A) | 0.03 | Orthogroups_2024-Update | |
Pp1s72_85V6 | No alias | histone h2a | 0.03 | Orthogroups_2024-Update | |
Sobic.002G329900.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Solyc11g073250 | No alias | Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
BP | GO:0015996 | chlorophyll catabolic process | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
BP | GO:0046149 | pigment catabolic process | IEP | Predicted GO |
BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0047746 | chlorophyllase activity | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
No external refs found! |