Solyc10g086700

Description : RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A061EYJ3_THECC)

Gene families : OG_42_0000872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc10g086700
Cluster	HCCA clusters: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method	Actions
GRMZM2G005000	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	79	130

External Links

No external refs found!