MA_9367g0020

Description : (o04886|pme1_citsi : 511.0) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at1g53830 : 497.0) encodes a pectin methylesterase; pectin methylesterase 2 (PME2); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plant-type cell wall; EXPRESSED IN: sepal, flower, root, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 3 (TAIR:AT3G14310.1); Has 3028 Blast hits to 2957 proteins in 336 species: Archae - 6; Bacteria - 620; Metazoa - 1; Fungi - 201; Plants - 2174; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 904.0) & (original description: no original description)

Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_9367g0020
Cluster	HCCA clusters: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
At1g11580	No alias	methylesterase PCR A [Source:TAIR;Acc:AT1G11580]	0.03	Orthogroups_2024-Update
At5g27870	No alias	Putative pectinesterase/pectinesterase inhibitor 28...	0.03	Orthogroups_2024-Update
Brara.F01763.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.03	Orthogroups_2024-Update
Glyma.09G042100	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	Orthogroups_2024-Update
Glyma.15G183700	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	Orthogroups_2024-Update
MA_51464g0010	No alias	(at4g02330 : 470.0) ATPMEPCRB; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
PSME_00056054-RA	No alias	(at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
Potri.001G162500	No alias	pectin methylesterase 3	0.02	Orthogroups_2024-Update
Pp1s32_31V6	No alias	putative pectin esterase [Oryza sativa (japonica cultivar-group)]	0.03	Orthogroups_2024-Update
Sopen03g041400	No alias	Pectinesterase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	Predicted GO
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0010112	regulation of systemic acquired resistance	IEP	Predicted GO
BP	GO:0031347	regulation of defense response	IEP	Predicted GO
BP	GO:0032101	regulation of response to external stimulus	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0043900	regulation of multi-organism process	IEP	Predicted GO
BP	GO:0045088	regulation of innate immune response	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0050776	regulation of immune response	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
BP	GO:0080134	regulation of response to stress	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	51	196
IPR000070	Pectinesterase_cat	244	541

External Links

No external refs found!

MA_9367g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation