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MA_9445g0010


Description : (at3g25600 : 149.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (p04352|calm_chlre : 98.6) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 298.0) & (original description: no original description)


Gene families : OG_42_0002131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9445g0010
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
A4A49_17896 No alias putative calcium-binding protein cml18 0.03 Orthogroups_2024-Update
Glyma.04G144800 No alias EF hand calcium-binding protein family 0.04 Orthogroups_2024-Update
Glyma.05G015500 No alias EF hand calcium-binding protein family 0.03 Orthogroups_2024-Update
Sobic.009G242700.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 74
IPR002048 EF_hand_dom 109 136
No external refs found!