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  5. MA_94639g0010

MA_94639g0010


Description : (at1g70210 : 160.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_94639g0010
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
At3g50070 No alias CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15] 0.03 Orthogroups_2024-Update
Bradi4g32556 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
Brara.G01181.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Brara.K01226.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
GRMZM2G007130 No alias cyclin d5;1 0.04 Orthogroups_2024-Update
GRMZM2G140633 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Glyma.03G069200 No alias CYCLIN D7;1 0.03 Orthogroups_2024-Update
Glyma.08G280600 No alias CYCLIN D4;1 0.01 Orthogroups_2024-Update
Glyma.12G105600 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
HORVU3Hr1G105610.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g37390 No alias cyclin, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00003592-RA No alias (at4g34160 : 230.0) encodes a cyclin D-type protein... 0.04 Orthogroups_2024-Update
Potri.001G292300 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Potri.005G141900 No alias CYCLIN D3;2 0.02 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Solyc07g054950 No alias cyclinD6_1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 212 283
IPR006671 Cyclin_N 58 187
No external refs found!