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  5. Solyc11g005190

Solyc11g005190


Description : Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G23730.1)


Gene families : OG_42_0006779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g005190
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
444188 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
At5g23730 No alias WD repeat-containing protein RUP2... 0.07 Orthogroups_2024-Update
At5g52250 No alias WD repeat-containing protein RUP1... 0.02 Orthogroups_2024-Update
Brara.I00603.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre01.g053850 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G008200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp2g18040.1 No alias protein kinase (PEK) 0.02 Orthogroups_2024-Update
Pp1s22_112V6 No alias ubiquitin ligase protein 0.05 Orthogroups_2024-Update
Seita.1G117200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G011201.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen11g001190 No alias WD domain, G-beta repeat 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 106 138
IPR001680 WD40_repeat 234 273
IPR001680 WD40_repeat 193 229
No external refs found!