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  5. MA_949447g0010

MA_949447g0010


Description : (q8gu92|pdr2_orysa : 473.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (at1g15520 : 467.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 934.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_949447g0010
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
A4A49_33262 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
MA_598099g0010 No alias (q5z9s8|pdr12_orysa : 976.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00012292-RA No alias (at2g29940 : 1536.0) pleiotropic drug resistance 3... 0.04 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00015447-RA No alias (at1g15210 : 1560.0) pleiotropic drug resistance 7... 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.9G187800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 101 305
No external refs found!