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  5. Solyc11g005370

Solyc11g005370


Description : Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** AT1G76860.1)


Gene families : OG_42_0005127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g005370
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Mp8g11310.1 No alias component LSm3 of U6-associated LSm accessory... 0.02 Orthogroups_2024-Update
Pp1s16_329V6 No alias lsm sm-like protein family member 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0052736 beta-glucanase activity IEP Predicted GO
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 16 92
No external refs found!