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  5. MA_96077g0020

MA_96077g0020


Description : (at5g20190 : 81.3) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)


Gene families : OG_42_0000923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_96077g0020
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Brara.B02523.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g42610 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_443910g0010 No alias (at5g20190 : 90.5) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00012819-RA No alias (at5g20190 : 134.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00038155-RA No alias (at4g17940 : 121.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Sopen03g035580 No alias TPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!