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  5. MA_96282g0010

MA_96282g0010


Description : no hits & (original description: no original description)


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_96282g0010
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
A4A49_14444 No alias putative polygalacturonase 0.06 Orthogroups_2024-Update
Bradi1g04641 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G004500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G162574 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G044200 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g59330 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g46510 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g10730 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
MA_63122g0010 No alias (at1g23460 : 261.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00025694-RA No alias (at1g80170 : 422.0) Pectin lyase-like superfamily... 0.07 Orthogroups_2024-Update
Potri.001G171900 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Sobic.001G045400.1 No alias polygalacturonase *(QRT2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.004G028700.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 77 122
No external refs found!