1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_9639040g0010

MA_9639040g0010


Description : (at1g13570 : 82.8) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56370.2); Has 1866 Blast hits to 1838 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1866; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description)


Gene families : OG_42_0000312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9639040g0010
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_31779 No alias f-boxfbd/lrr-repeat protein 0.04 Orthogroups_2024-Update
LOC_Os08g36010 No alias OsFBX295 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_138711g0010 No alias (at1g13570 : 88.6) F-box/RNI-like superfamily protein;... 0.04 Orthogroups_2024-Update
Seita.3G241700.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc06g005050 No alias F-box family protein (AHRD V3.3 *** B9HWR1_POPTR) 0.03 Orthogroups_2024-Update
Solyc08g074800 No alias F-box/RNI/FBD-like domain protein (AHRD V3.3 --* G7I7L3_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!