Description : (at5g62430 : 134.0) Dof-type zinc finger domain-containing protein, similar to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Represses expression of Constans (CO), a circadian regulator of flowering time. Interacts with LKP2 and FKF1. Expression oscillates under constant light conditions. Mainly expressed in the vasculature of cotyledons, leaves and hypocotyls, but also in stomata. Localized to the nucleus and acts as a repressor of CONSTANS through binding to the Dof binding sites in the CO promoter. Protein gets degraded by FKF1 in the afternoon.; cycling DOF factor 1 (CDF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 1130 Blast hits to 1085 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1125; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p38564|mnb1a_maize : 98.6) Dof zinc finger protein MNB1A - Zea mays (Maize) & (reliability: 268.0) & (original description: no original description)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_97259g0020 | |
Cluster | HCCA clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_10722 | No alias | dof zinc finger protein dof2.4 | 0.02 | Orthogroups_2024-Update | |
A4A49_12312 | No alias | dof zinc finger protein dof2.1 | 0.03 | Orthogroups_2024-Update | |
A4A49_24184 | No alias | dof zinc finger protein dof3.1 | 0.03 | Orthogroups_2024-Update | |
A4A49_34579 | No alias | dof zinc finger protein pbf | 0.04 | Orthogroups_2024-Update | |
At1g26790 | No alias | Dof-type zinc finger DNA-binding family protein... | 0.05 | Orthogroups_2024-Update | |
At1g64620 | No alias | Dof zinc finger protein DOF1.8... | 0.04 | Orthogroups_2024-Update | |
At1g69570 | No alias | Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] | 0.03 | Orthogroups_2024-Update | |
At2g34140 | No alias | Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] | 0.03 | Orthogroups_2024-Update | |
At5g39660 | No alias | Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] | 0.04 | Orthogroups_2024-Update | |
Bradi3g51510 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Brara.C00072.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Brara.D00980.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Brara.H01999.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Brara.I00088.1 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G327189 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G358100 | No alias | DNA binding with one finger 2.4 | 0.02 | Orthogroups_2024-Update | |
Glyma.15G039300 | No alias | OBF-binding protein 3 | 0.04 | Orthogroups_2024-Update | |
Glyma.15G075800 | No alias | TARGET OF MONOPTEROS 6 | 0.02 | Orthogroups_2024-Update | |
Glyma.17G180600 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G260500 | No alias | cycling DOF factor 2 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G118000 | No alias | cycling DOF factor 3 | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g55340 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g47810 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g55610 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os08g38220 | No alias | dof zinc finger domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00041316-RA | No alias | (at5g39660 : 139.0) Dof-type zinc finger... | 0.06 | Orthogroups_2024-Update | |
Potri.011G054300 | No alias | OBF binding protein 4 | 0.04 | Orthogroups_2024-Update | |
Potri.011G055600 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Potri.019G040700 | No alias | cycling DOF factor 3 | 0.02 | Orthogroups_2024-Update | |
Pp1s124_139V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Pp1s170_42V6 | No alias | f-box family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s199_87V6 | No alias | cycling dof factor 2 | 0.02 | Orthogroups_2024-Update | |
Pp1s26_282V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Seita.5G136300.1 | No alias | transcription factor *(DOF) | 0.04 | Orthogroups_2024-Update | |
Sobic.001G034300.3 | No alias | transcription factor *(DOF) | 0.01 | Orthogroups_2024-Update | |
Sobic.001G420300.1 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
Sobic.003G121400.1 | No alias | transcription factor *(DOF) | 0.02 | Orthogroups_2024-Update | |
Sobic.007G223200.2 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Solyc01g096120 | No alias | Dof zinc finger protein1 | 0.02 | Orthogroups_2024-Update | |
Solyc02g088070 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Solyc02g090310 | No alias | Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Solyc04g070960 | No alias | Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Solyc06g069760 | No alias | Dof zinc finger protein 22 | 0.03 | Orthogroups_2024-Update | |
Solyc06g071480 | No alias | Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) | 0.03 | Orthogroups_2024-Update | |
Solyc08g082910 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) | 0.04 | Orthogroups_2024-Update | |
Solyc10g086440 | No alias | Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) | 0.04 | Orthogroups_2024-Update | |
Solyc11g072500 | No alias | Dof domain, zinc finger family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen02g015430 | No alias | Dof domain, zinc finger | 0.07 | Orthogroups_2024-Update | |
Sopen02g021750 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen02g032780 | No alias | Dof domain, zinc finger | 0.04 | Orthogroups_2024-Update | |
Sopen02g035000 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen06g026650 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen06g027770 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen06g032440 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen08g004350 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update | |
Sopen10g035820 | No alias | Dof domain, zinc finger | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 78 | 132 |
No external refs found! |