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  5. MA_9738483g0010

MA_9738483g0010


Description : (p49199|rs8_orysa : 198.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (at5g59240 : 192.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)


Gene families : OG_42_0001226 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9738483g0010
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_00202 No alias 40s ribosomal protein s8 0.03 Orthogroups_2024-Update
Bradi1g51357 No alias Ribosomal protein S8e family protein 0.06 Orthogroups_2024-Update
Bradi3g43560 No alias Ribosomal protein S8e family protein 0.06 Orthogroups_2024-Update
Brara.B00878.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.C00929.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.J01583.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Cre06.g272800 No alias Ribosomal protein S8e family protein 0.03 Orthogroups_2024-Update
Glyma.08G346500 No alias Ribosomal protein S8e family protein 0.03 Orthogroups_2024-Update
Glyma.16G087700 No alias Ribosomal protein S8e family protein 0.04 Orthogroups_2024-Update
PSME_00001605-RA No alias (q08069|rs8_maize : 279.0) 40S ribosomal protein S8 -... 0.03 Orthogroups_2024-Update
Potri.001G262100 No alias Ribosomal protein S8e family protein 0.03 Orthogroups_2024-Update
Potri.009G056900 No alias Ribosomal protein S8e family protein 0.03 Orthogroups_2024-Update
Pp1s162_83V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s223_73V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s227_85V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s292_14V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Seita.1G314000.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Seita.7G057900.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.004G244800.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.006G035900.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Solyc06g007570 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4C3D8_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g083180 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CAH3_SOLLC) 0.04 Orthogroups_2024-Update
Solyc07g065170 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CHJ6_SOLLC) 0.03 Orthogroups_2024-Update
Sopen06g002470 No alias Ribosomal protein S8e 0.03 Orthogroups_2024-Update
Sopen06g034570 No alias Ribosomal protein S8e 0.02 Orthogroups_2024-Update
Sopen07g033390 No alias Ribosomal protein S8e 0.03 Orthogroups_2024-Update
Sopen10g002020 No alias Ribosomal protein S8e 0.02 Orthogroups_2024-Update
evm.model.contig_4462.6 No alias (q08069|rs8_maize : 255.0) 40S ribosomal protein S8 -... 0.03 Orthogroups_2024-Update
evm.model.tig00020610.79 No alias (p49199|rs8_orysa : 269.0) 40S ribosomal protein S8 -... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 2 163
No external refs found!