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  5. MA_97951g0010

MA_97951g0010


Description : (at5g59970 : 160.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 160.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 320.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_97951g0010
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
167497 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.05 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_64267 No alias histone h4 0.03 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Brara.C01220.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.07 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.11 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.09 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.08 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.05 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.05 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g506350 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.1 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.03 Orthogroups_2024-Update
Glyma.17G203400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.04 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU2Hr1G098340.4 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_7644388g0010 No alias (at5g59970 : 168.0) Histone superfamily protein;... 0.05 Orthogroups_2024-Update
MA_89764g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.08 Orthogroups_2024-Update
MA_97185g0020 No alias (at5g59970 : 130.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.04 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.04 Orthogroups_2024-Update
PSME_00034343-RA No alias (at5g59970 : 162.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Pp1s197_4V6 No alias histone h4 0.02 Orthogroups_2024-Update
Pp1s378_30V6 No alias histone h4 0.06 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.07 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.09 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g072240 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g028560 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 69 128
No external refs found!