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  5. MA_98067g0010

MA_98067g0010


Description : (at3g53360 : 472.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0; Bacteria - 13; Metazoa - 180; Fungi - 93; Plants - 49461; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 944.0) & (original description: no original description)


Gene families : OG_42_0003994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_98067g0010
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G120630.5 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00037569-RA No alias (at2g13600 : 504.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 415 441
IPR002885 Pentatricopeptide_repeat 115 139
IPR002885 Pentatricopeptide_repeat 520 541
IPR002885 Pentatricopeptide_repeat 241 287
IPR002885 Pentatricopeptide_repeat 342 388
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 40 87
IPR002885 Pentatricopeptide_repeat 444 489
No external refs found!