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  5. MA_9839150g0010

MA_9839150g0010


Description : (at1g07900 : 148.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9839150g0010
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
At3g27650 No alias LOB domain-containing protein 25... 0.05 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02463.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G447176 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
MA_9412105g0010 No alias (at2g40470 : 200.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
MA_9924708g0010 No alias (at1g31320 : 131.0) LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00041736-RA No alias (at1g07900 : 133.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Potri.012G083500 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 15 112
No external refs found!