MA_99845g0010

Description : (at4g14320 : 160.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (q96499|rl44_goshi : 159.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (reliability: 320.0) & (original description: no original description)

Gene families : OG_42_0001870 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_99845g0010
Cluster	HCCA clusters: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
161986	No alias	Zinc-binding ribosomal protein family protein	0.07	Orthogroups_2024-Update
A4A49_42104	No alias	60s ribosomal protein l44	0.09	Orthogroups_2024-Update
A4A49_63762	No alias	60s ribosomal protein l44	0.05	Orthogroups_2024-Update
At3g23390	No alias	60S ribosomal protein L36a...	0.04	Orthogroups_2024-Update
Bradi1g26010	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Bradi1g28750	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Brara.A02648.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.D00648.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.G00538.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Brara.H01878.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Cre06.g310700	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
GRMZM2G009412	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Glyma.05G120700	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Glyma.08G075500	No alias	Zinc-binding ribosomal protein family protein	0.04	Orthogroups_2024-Update
Glyma.08G181300	No alias	Zinc-binding ribosomal protein family protein	0.04	Orthogroups_2024-Update
Glyma.15G051000	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
HORVU5Hr1G081590.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
HORVU5Hr1G101600.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
HORVU7Hr1G104300.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Kfl00989_0050	kfl00989_0050_v1.1	(q96499\|rl44_goshi : 200.0) 60S ribosomal protein L44 -...	0.06	Orthogroups_2024-Update
Mp2g25770.1	No alias	component RPL36a of LSU proteome component	0.03	Orthogroups_2024-Update
PSME_00003754-RA	No alias	(at4g14320 : 164.0) Zinc-binding ribosomal protein...	0.05	Orthogroups_2024-Update
Potri.010G251500	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Pp1s115_63V6	No alias	60s ribosomal protein l44	0.07	Orthogroups_2024-Update
Pp1s22_326V6	No alias	60s ribosomal protein l44	0.11	Orthogroups_2024-Update
Pp1s2_415V6	No alias	60s ribosomal protein l44	0.08	Orthogroups_2024-Update
Pp1s6_198V6	No alias	60s ribosomal protein l44	0.13	Orthogroups_2024-Update
Pp1s74_73V6	No alias	60s ribosomal protein l44	0.1	Orthogroups_2024-Update
Seita.9G438600.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Sobic.001G018800.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Sobic.002G175100.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Solyc03g112850	No alias	60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI)	0.09	Orthogroups_2024-Update
Solyc06g071530	No alias	60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI)	0.06	Orthogroups_2024-Update
Sopen03g031930	No alias	Ribosomal protein L44	0.07	Orthogroups_2024-Update
Sopen06g027820	No alias	Ribosomal protein L44	0.07	Orthogroups_2024-Update
evm.model.contig_2517.1	No alias	(at4g14320 : 166.0) Zinc-binding ribosomal protein...	0.13	Orthogroups_2024-Update
evm.model.tig00000489.11	No alias	(q96499\|rl44_goshi : 166.0) 60S ribosomal protein L44 -...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0005956	protein kinase CK2 complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
BP	GO:0010921	regulation of phosphatase activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predicted GO
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019207	kinase regulator activity	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019212	phosphatase inhibitor activity	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0019887	protein kinase regulator activity	IEP	Predicted GO
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0035303	regulation of dephosphorylation	IEP	Predicted GO
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predicted GO
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051336	regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000552	Ribosomal_L44e	19	93

External Links

No external refs found!

MA_99845g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation