- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : LOW QUALITY:TPR1 (AHRD V3.3 *-* F2XF89_SOYBN)
Gene families : OG_42_0004576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004576_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc11g006360 | |
| Cluster | HCCA clusters: Cluster_228 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g58150 | No alias | expressed protein | 0.03 | Orthogroups_2024-Update | |
| Sopen11g002260 | No alias | hypothetical protein | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| MF | GO:0003995 | acyl-CoA dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| CC | GO:0005777 | peroxisome | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0009611 | response to wounding | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |