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  5. Pp1s100_99V6

Pp1s100_99V6


Description : beta-expansin 3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s100_99V6
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.05 Orthogroups_2024-Update
Bradi3g33160 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G154178 No alias expansin B4 0.02 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.02 Orthogroups_2024-Update
MA_166764g0010 No alias (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
MA_78155g0010 No alias (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.05 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Sobic.001G301500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 169 253
IPR009009 RlpA-like_DPBB 77 157
No external refs found!