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  5. Pp1s101_148V6

Pp1s101_148V6


Description : f-box family protein


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s101_148V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
At1g25280 No alias Tubby-like F-box protein 10... 0.03 Orthogroups_2024-Update
At1g43640 No alias Tubby-like F-box protein 5... 0.03 Orthogroups_2024-Update
At2g18280 No alias Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6] 0.04 Orthogroups_2024-Update
Bradi1g18380 No alias tubby like protein 3 0.04 Orthogroups_2024-Update
Bradi2g46350 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Bradi4g24740 No alias tubby like protein 1 0.02 Orthogroups_2024-Update
Glyma.07G251800 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
Glyma.14G073500 No alias tubby like protein 6 0.03 Orthogroups_2024-Update
Glyma.15G098200 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G076900.2 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G040000.2 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g47640 No alias OsFBT4 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g22800 No alias OsFBT5 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g47110 No alias OsFBT11 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00056327-RA No alias (at1g53320 : 261.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
Potri.007G023366 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
Potri.008G195200 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
Pp1s222_25V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G148500.1 No alias TUB-type transcription factor 0.05 Orthogroups_2024-Update
Seita.3G227800.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G277200.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 175 469
IPR001810 F-box_dom 111 160
No external refs found!