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  5. Solyc11g006440

Solyc11g006440


Description : LOW QUALITY:Blue copper protein (AHRD V3.3 *** W9R799_9ROSA)


Gene families : OG_42_0000026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g006440
Cluster HCCA clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
Bradi3g09230 No alias Cupredoxin superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G066810.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G066820.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g43660 No alias plastocyanin-like domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11490 No alias plastocyanin-like domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_497147g0010 No alias (at5g07475 : 102.0) Cupredoxin superfamily protein;... 0.04 Orthogroups_2024-Update
Sobic.001G119000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G099900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g029710 No alias Plastocyanin-like domain 0.03 Orthogroups_2024-Update
Sopen07g003990 No alias Plastocyanin-like domain 0.02 Orthogroups_2024-Update
Sopen10g032030 No alias Plastocyanin-like domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 37 121
No external refs found!