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  5. Pp1s101_208V6

Pp1s101_208V6


Description : 40s ribosomal protein s5


Gene families : OG_42_0002111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s101_208V6
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Bradi2g03760 No alias ribosomal protein 5A 0.02 Orthogroups_2024-Update
Cre06.g290950 No alias ribosomal protein 5B 0.01 Orthogroups_2024-Update
HORVU3Hr1G015190.2 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Mp3g10570.1 No alias component RPS5 of SSU proteome 0.02 Orthogroups_2024-Update
Seita.8G114300.1 No alias component *(uS7) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc10g078620 No alias Ribosomal protein S5/S7 (AHRD V3.3 *** A0A103XH68_CYNCS) 0.03 Orthogroups_2024-Update
Sopen10g029250 No alias Ribosomal protein S7p/S5e 0.03 Orthogroups_2024-Update
evm.model.contig_670.1 No alias (o65731|rs5_cicar : 298.0) 40S ribosomal protein S5... 0.01 Orthogroups_2024-Update
evm.model.tig00021332.10 No alias (o65731|rs5_cicar : 303.0) 40S ribosomal protein S5... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 51 196
No external refs found!