1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s103_27V6

Pp1s103_27V6


Description : T1N15.11; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0002509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s103_27V6
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Brara.G02433.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G126507 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Solyc06g068930 No alias Jasmonate ZIM domain protein g (AHRD V3.3 *** I3WTA5_NICAT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 362 385
IPR010399 Tify_dom 265 295
No external refs found!