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  5. Pp1s104_30V6

Pp1s104_30V6


No description available


Gene families : OG_42_0004539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s104_30V6
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At4g15770 No alias 60S ribosome subunit biogenesis protein NIP7 homolog... 0.02 Orthogroups_2024-Update
Brara.A01962.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G468932 No alias RNA binding 0.02 Orthogroups_2024-Update
LOC_Os07g47420 No alias 60S ribosome subunit biogenesis protein NIP7, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.004G325200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g041670 No alias Uncharacterised protein family (UPF0113) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR005155 Rbsml_synth_fac_NIP7-like 103 181
No external refs found!