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  5. Solyc11g006980

Solyc11g006980


Description : Germin family 1 protein (AHRD V3.3 *** A0A072VRM6_MEDTR)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g006980
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Bradi3g15220 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G109190.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.015G068200 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Sobic.007G067600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen11g002900 No alias Cupin 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 59 201
No external refs found!