1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s106_68V6

Pp1s106_68V6


Description : thioredoxin m


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s106_68V6
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Bradi5g26060 No alias thioredoxin X 0.03 Orthogroups_2024-Update
Brara.C02756.1 No alias thioredoxin *(TRX-M) 0.02 Orthogroups_2024-Update
Brara.C03566.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
Brara.E02602.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
Cre01.g052250 No alias thioredoxin X 0.03 Orthogroups_2024-Update
GRMZM2G181258 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Glyma.04G242000 No alias Thioredoxin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G245200 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Glyma.12G151400 No alias thioredoxin M-type 4 0.05 Orthogroups_2024-Update
Glyma.20G104000 No alias thioredoxin X 0.02 Orthogroups_2024-Update
HORVU2Hr1G075240.5 No alias thioredoxin *(TRX-M) 0.02 Orthogroups_2024-Update
LOC_Os04g44830 No alias thioredoxin, putative, expressed 0.03 Orthogroups_2024-Update
MA_474303g0010 No alias (p07591|trxm_spiol : 182.0) Thioredoxin M-type,... 0.04 Orthogroups_2024-Update
Mp3g04790.1 No alias X-type thioredoxin 0.02 Orthogroups_2024-Update
Mp4g18950.1 No alias M-type thioredoxin 0.03 Orthogroups_2024-Update
Potri.005G058400 No alias Thioredoxin superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G186800 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Potri.007G074000 No alias thioredoxin X 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 89 187
No external refs found!