Description : LOW QUALITY:DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* RPOC2_SOLLC)
Gene families : OG_42_0001520 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001520_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc11g007260 | |
Cluster | HCCA clusters: Cluster_147 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g39195 | No alias | DNA-directed RNA polymerase family protein | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G045380.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g057100 | No alias | LOW QUALITY:DNA-directed RNA polymerase subunit beta''... | 0.04 | Orthogroups_2024-Update | |
Solyc08g028900 | No alias | DNA-directed RNA polymerase subunit beta'' (AHRD V3.3... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predicted GO |
BP | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0006848 | pyruvate transport | IEP | Predicted GO |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Predicted GO |
MF | GO:0008061 | chitin binding | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009579 | thylakoid | IEP | Predicted GO |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predicted GO |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
BP | GO:0015718 | monocarboxylic acid transport | IEP | Predicted GO |
BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
BP | GO:0022904 | respiratory electron transport chain | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Predicted GO |
BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
MF | GO:0048038 | quinone binding | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |