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  5. Pp1s110_124V6

Pp1s110_124V6


Description : argonaute protein group


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s110_124V6
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_38573 No alias protein argonaute 2 0.03 Orthogroups_2024-Update
Seita.4G288700.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Seita.7G201100.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
Solyc03g111760 No alias Argonaute15 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR032472 ArgoL2 437 481
IPR003165 Piwi 578 883
IPR003100 PAZ_dom 313 427
IPR014811 ArgoL1 244 291
IPR032474 Argonaute_N 69 232
No external refs found!