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  5. Pp1s110_33V6

Pp1s110_33V6


No description available


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s110_33V6
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
A4A49_07643 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
A4A49_10334 No alias compass-like h3k4 histone methylase component wdr5a 0.02 Orthogroups_2024-Update
Glyma.01G182100 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G185900 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G106030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Pp1s39_313V6 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g044320 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen05g002300 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 340 381
IPR001680 WD40_repeat 194 230
IPR001680 WD40_repeat 174 188
IPR001680 WD40_repeat 296 331
No external refs found!