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  5. Solyc11g007580

Solyc11g007580


Description : DNA demethylase 3


Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g007580
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Pp1s14_101V6 No alias endonuclease iii protein 0.03 Orthogroups_2024-Update
Pp1s480_4V6 No alias dna glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
MF GO:0005351 carbohydrate:proton symporter activity IEP Predicted GO
MF GO:0005402 carbohydrate:cation symporter activity IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0008643 carbohydrate transport IEP Predicted GO
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR028924 Perm-CXXC 1153 1184
IPR028925 RRM_DME 1187 1287
No external refs found!