Pp1s114_79V6

Description : 60s ribosomal protein l23

Gene families : OG_42_0001290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s114_79V6
Cluster	HCCA clusters: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
165708	No alias	Ribosomal protein L14p/L23e family protein	0.08	Orthogroups_2024-Update
A4A49_26558	No alias	60s ribosomal protein l23	0.05	Orthogroups_2024-Update
Bradi1g75790	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
Bradi3g28300	No alias	Ribosomal protein L14p/L23e family protein	0.04	Orthogroups_2024-Update
Bradi3g55140	No alias	Ribosomal protein L14p/L23e family protein	0.04	Orthogroups_2024-Update
Brara.A03771.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.C03052.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.E03449.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.H03046.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.I05490.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.J00259.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Cre04.g211800	No alias	Ribosomal protein L14p/L23e family protein	0.07	Orthogroups_2024-Update
GRMZM2G150058	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
GRMZM2G171181	No alias	Ribosomal protein L14p/L23e family protein	0.02	Orthogroups_2024-Update
Glyma.03G166700	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
Glyma.13G126400	No alias	Ribosomal protein L14p/L23e family protein	0.1	Orthogroups_2024-Update
Glyma.19G167800	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G039160.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
HORVU4Hr1G083840.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
HORVU6Hr1G090170.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Kfl00761_0070	kfl00761_0070_v1.1	(at3g04400 : 234.0) embryo defective 2171 (emb2171);...	0.04	Orthogroups_2024-Update
LOC_Os10g32920	No alias	ribosomal protein, putative, expressed	0.03	Orthogroups_2024-Update
Mp6g14310.1	No alias	component RPL23 of LSU proteome component	0.06	Orthogroups_2024-Update
PSME_00015897-RA	No alias	(at3g04400 : 271.0) embryo defective 2171 (emb2171);...	0.02	Orthogroups_2024-Update
Potri.002G257500	No alias	Ribosomal protein L14p/L23e family protein	0.04	Orthogroups_2024-Update
Potri.010G066400	No alias	Ribosomal protein L14p/L23e family protein	0.02	Orthogroups_2024-Update
Pp1s73_232V6	No alias	60s ribosomal protein l23	0.04	Orthogroups_2024-Update
Seita.1G363100.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Seita.9G546200.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.001G510800.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Sobic.004G342400.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Solyc06g008170	No alias	50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)	0.04	Orthogroups_2024-Update
Solyc06g083780	No alias	50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)	0.04	Orthogroups_2024-Update
Solyc09g072870	No alias	50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)	0.05	Orthogroups_2024-Update
Solyc09g090610	No alias	50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)	0.03	Orthogroups_2024-Update
Sopen06g035190	No alias	Ribosomal protein L14p/L23e	0.06	Orthogroups_2024-Update
Sopen09g028670	No alias	Ribosomal protein L14p/L23e	0.06	Orthogroups_2024-Update
Sopen09g033550	No alias	Ribosomal protein L14p/L23e	0.04	Orthogroups_2024-Update
evm.model.contig_548.2	No alias	(at3g04400 : 225.0) embryo defective 2171 (emb2171);...	0.09	Orthogroups_2024-Update
evm.model.tig00021290.9	No alias	(at3g04400 : 253.0) embryo defective 2171 (emb2171);...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
CC	GO:0000813	ESCRT I complex	IEP	Predicted GO
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predicted GO
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	Predicted GO
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015002	heme-copper terminal oxidase activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Predicted GO
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Predicted GO
BP	GO:0016197	endosomal transport	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predicted GO
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Predicted GO
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
CC	GO:0036452	ESCRT complex	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044440	endosomal part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
CC	GO:0045277	respiratory chain complex IV	IEP	Predicted GO
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
BP	GO:0071985	multivesicular body sorting pathway	IEP	Predicted GO
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Predicted GO
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	22	140

External Links

No external refs found!

Pp1s114_79V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation