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  5. Solyc11g007940

Solyc11g007940


Description : RNA-binding protein Nova-1 (AHRD V3.3 *** A0A151T0U1_CAJCA)


Gene families : OG_42_0003785 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g007940
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G008080.1 No alias virus infection resistance factor *(BTR1) 0.01 Orthogroups_2024-Update
Mp6g08740.1 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Sopen11g003810 No alias KH domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 44 108
IPR004088 KH_dom_type_1 254 318
IPR004088 KH_dom_type_1 129 193
No external refs found!